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Loukas Petridis, PhD

Current research

 

Loukas is currently investigating at a molecular level aspects of biomass recalcitrance , the natural resistance of plant cell walls to enzymatic degradation. Biomass recalcitrance is the bottleneck in the production of sustainable biofuels. Biomass recalcitrance is attributed mainly to two factors, the crystalline nature of cellulose and the presence of lignin (mainly), hemicellulose and pectins that coat the cellulose fibrils.

As a first step, a CHARMM force field has been created for lignin (Petridis & Smith, 2008, J Comp Chem). Lignin topologies and 3D structures were generated and Molecular Dynamics simulations performed.  Results pf the simulations are compared with Small Angle Neutron Scattering experiments to verify the applicability of the initial models.

 

Biography

 

Loukas was born in Athens, Greece and read Natural Sciences in the University of Cambridge, UK and then continued to obtain his PhD under the supervision of Prof Eugene Terentjiev. His work involved the theoretical study of phase transitions in Nematic Elastomers. He then moved to join Prof Jeremy Smith's lab in Oak Ridge, where he is examining at a molecular level some aspects of biomass recalcitrance, the natural resistance of plant cell walls to enzymatic degradation.
 

Publications

 

5 R. Shulz, B. Lindner, L. Petridis and J.C. Smith (2009); Scaling of Multimillion-atom Biological Molecular Dynamics Simulation on a Petascale Supercomputer; Journal of Chemical Theory and Computation 2009 5 (10), 2798-2808 (DOI: 10.1021/ct900292r)

L. Petridis and J.C. Smith (2009); A molecular mechanics force field for lignin; Journal of Computational Chemistry 30 457-467

L. Petridis and J.C. Smith (2008); Cellulosic ethanol: progress towards a simulation model of lignocellulosic biomass; Journal of Physics: Conference Series 125 (2008) 012055

L. Petridis and E. M. Terentjev (2006); Nematic-isotropic transition with quenched disorder; Physical Review E 74 1539-3755

L. Petridis and E. M. Terentjev (2006); Quenched disorder and spin-glass correlations in XY nematics; Journal of Physics A-Mathematical and General 39 9693-9708

Latest content created by this user

Page
Biophysical Origins of Biomass Recalcitrance Feb 12, 2008
Event
Talk, Prof. Jianzhong Wu Oct 29, 2009
Talk, Barbara Collignon Feb 17, 2009
Talk, Prof. Volodymyr Babin Sep 09, 2009
Talk, Moumita Saharay Feb 17, 2009
Talk, Benjamin Lindner May 11, 2009
File
Petridis_helix-coil Jul 21, 2008
Petridis_Bioenergy Jul 21, 2008
Folder
Loukas Petridis, Ph.d. Feb 13, 2008
Image
BESC Retreat Poster Sep 29, 2009
lignocellulose Sep 29, 2009
poster Apr 02, 2008
All content created by Loukas Petridis, PhD…
Contact

Administrative Assistant

Julia B. Cooper


Tel.: +1 865 574 6308

Fax.: +1 865 576 7651

email: cooperjb@ornl.gov